dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000004427_00424

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Basic Information help

Species

Lineage

Bacteria; Firmicutes_A; Clostridia; TANB77; CAG-465; CAG-465;

CAZyme ID

MGYG000004427_00424

CAZy Family

GT84

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1863		216696.06	8.4365

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004427	1356199	MAG	Israel	Asia

Gene Location

Start: 85961; End: 91552 Strand: +

Full Sequence Download help

Enzyme Prediction help

EC	2.4.1.-

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GT84	1139	1353	4.1e-85	0.9953488372093023

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd11753	GH94N_ChvB_NdvB_2_like	2.98e-36	1345	1656	1	314	Second GH94N domain of cyclic beta 1-2 glucan synthetase and similar domains. The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cyclic beta 1-2 glucan synthetase (EC:2.4.1.20) or ChvB (encoded by the chromosomal chvB virulence gene). This second of two tandemly repeated GH94-N-terminal-like domains has not been characterized functionally. Some beta 1-2 glucan synthetases are annotated as NdvB (nodule development B) gene products, glycosyltransferases required for the synthesis of cyclic beta-(1,2)-glucans, which play a role in interactions between bacteria and plants.
pfam10091	Glycoamylase	9.83e-29	1139	1353	1	215	Putative glucoamylase. The structure of UniProt:Q5LIB7 has an alpha/alpha toroid fold and is similar structurally to a number of glucoamylases. Most of these structural homologs are glucoamylases, involved in breaking down complex sugars (e.g. starch). The biologically relevant state is likely to be monomeric. The putative active site is located at the centre of the toroid with a well defined large cavity.
pfam06165	Glyco_transf_36	1.25e-22	1424	1651	14	247	Glycosyltransferase family 36. The glycosyltransferase family 36 includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-). Many members of this family contain two copies of this domain.
cd11751	GH94N_like_4	3.43e-08	1452	1656	7	221	Glycoside hydrolase family 94 N-terminal-like domain of uncharacterized function. The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-), amongst other members. Their N-terminal domain is involved in oligomerization and may play a role in catalysis, but it is separate from the catalytic domain [an (alpha/alpha)(6) barrel]. The GH64N domain, as represented by this model, is found near the N-terminus of GH94 members and related proteins with uncharacterized specificities.
COG5368	COG5368	3.48e-07	955	1356	14	422	Uncharacterized protein [Function unknown].

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AEV69563.1	0.0	13	1823	72	2074
ABY92281.1	1.75e-318	13	1824	72	2041
AEM79409.1	3.51e-318	13	1824	73	2042
ADV79124.1	3.51e-318	13	1824	72	2041
ABY94171.1	3.51e-318	13	1824	72	2041

PDB Hits help

has no PDB hit.

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P20471	1.57e-195	19	1775	69	1935	Cyclic beta-(1,2)-glucan synthase NdvB OS=Rhizobium meliloti (strain 1021) OX=266834 GN=ndvB PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000062	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations download full data without filtering help

start	end
365	387
392	409
765	787
789	811
843	862
886	908
913	935
996	1015