Species | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Alphaproteobacteria; RF32; CAG-977; ; | |||||||||||
CAZyme ID | MGYG000004485_00745 | |||||||||||
CAZy Family | GH24 | |||||||||||
CAZyme Description | Lysozyme RrrD | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 11102; End: 11557 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH24 | 2 | 136 | 2.6e-44 | 0.9927007299270073 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
cd00737 | lyz_endolysin_autolysin | 3.75e-66 | 6 | 140 | 1 | 135 | endolysin and autolysin. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan. |
cd16901 | lyz_P1 | 5.11e-41 | 2 | 139 | 2 | 138 | P1 lysozyme Lyz-like proteins. Enterobacteria phage P1 lysozyme Lyz is secreted to the Escherichia coli periplasm where it is membrane bound and inactive. Activation involves the release from the membrane, an intramolecular thiol-disulfide isomerization and extensive structural rearrangement of the N-terminal region. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan. |
COG3772 | RrrD | 6.20e-40 | 1 | 140 | 6 | 147 | Phage-related lysozyme (muramidase), GH24 family [Cell wall/membrane/envelope biogenesis]. |
cd16900 | endolysin_R21-like | 8.38e-34 | 9 | 139 | 11 | 140 | endolysin R21-like proteins. Unlike T4 E phage lysozyme, the endolysin R21 from Enterobacteria phage P21 has an N-terminal SAR (signal-arrest-release) domain that anchors the endolysin to the membrane in an inactive form, which act to prevent premature lysis of the infected bacterium. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan. |
pfam00959 | Phage_lysozyme | 5.10e-16 | 29 | 134 | 3 | 107 | Phage lysozyme. This family includes lambda phage lysozyme and E. coli endolysin. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
BCL40994.1 | 4.23e-43 | 2 | 141 | 4 | 145 |
ART48173.1 | 7.43e-42 | 2 | 140 | 4 | 144 |
AJE16588.1 | 1.13e-40 | 2 | 140 | 4 | 144 |
QMU59023.1 | 1.84e-40 | 2 | 140 | 4 | 142 |
AVF36715.1 | 6.28e-40 | 4 | 140 | 10 | 146 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
6H9D_A | 2.87e-23 | 2 | 140 | 6 | 146 | ChainA, Lysozyme [Asticcacaulis excentricus],6H9D_B Chain B, Lysozyme [Asticcacaulis excentricus],6H9D_C Chain C, Lysozyme [Asticcacaulis excentricus] |
6ET6_A | 8.90e-23 | 3 | 143 | 53 | 196 | ChainA, Lysozyme [Acinetobacter baumannii] |
7M5I_A | 6.26e-18 | 2 | 140 | 9 | 153 | ChainA, Endolysin [Escherichia coli O157 typing phage 15],7M5I_B Chain B, Endolysin [Escherichia coli O157 typing phage 15] |
2ANV_A | 2.51e-17 | 2 | 137 | 4 | 142 | ChainA, Lysozyme [Lederbergvirus P22],2ANV_B Chain B, Lysozyme [Lederbergvirus P22],2ANX_A Chain A, Lysozyme [Lederbergvirus P22],2ANX_B Chain B, Lysozyme [Lederbergvirus P22] |
3HDF_A | 3.08e-17 | 14 | 139 | 10 | 134 | ChainA, Lysozyme [Enterobacteria phage P21],3HDF_B Chain B, Lysozyme [Enterobacteria phage P21] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q9T1T5 | 7.21e-26 | 2 | 140 | 3 | 143 | Endolysin OS=Acyrthosiphon pisum secondary endosymbiont phage 1 OX=2682836 GN=13 PE=3 SV=1 |
P07540 | 2.21e-22 | 2 | 140 | 3 | 142 | Endolysin OS=Bacillus phage PZA OX=10757 GN=15 PE=3 SV=1 |
P11187 | 8.53e-22 | 2 | 140 | 3 | 142 | Endolysin OS=Bacillus phage phi29 OX=10756 GN=15 PE=1 SV=1 |
Q37896 | 1.30e-21 | 2 | 140 | 3 | 142 | Endolysin OS=Bacillus phage B103 OX=10778 GN=15 PE=3 SV=1 |
O80292 | 1.44e-17 | 14 | 139 | 37 | 161 | SAR-endolysin OS=Bacteriophage PS119 OX=83128 GN=19 PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000061 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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