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CAZyme Information: MGYG000004501_01691

You are here: Home > Sequence: MGYG000004501_01691

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp900760665
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp900760665
CAZyme ID MGYG000004501_01691
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
624 68747.34 8.3912
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004501 2469413 MAG Israel Asia
Gene Location Start: 10632;  End: 12506  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004501_01691.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 68 249 4.5e-29 0.4988399071925754

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 4.04e-11 63 260 46 251
Glycosyl hydrolase family 10.
COG3693 XynA 1.04e-10 63 266 69 285
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
smart00633 Glyco_10 2.45e-08 63 243 3 194
Glycosyl hydrolase family 10.
pfam01229 Glyco_hydro_39 6.14e-05 54 206 61 226
Glycosyl hydrolases family 39.
COG3867 GanB 0.002 46 174 69 219
Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 7.13e-186 2 600 4 593
QDU57372.1 1.28e-94 26 622 29 622
AVM44901.1 7.54e-72 1 590 6 600
AHF90941.1 1.29e-51 26 588 233 817
QEM45594.1 1.03e-35 52 250 67 279

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 7.34e-13 28 245 107 343
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]
4ZN2_A 7.43e-11 50 250 43 258
Glycosylhydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_B Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_C Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_D Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
5BX9_A 7.43e-11 50 250 43 258
Structureof PslG from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],5BXA_A Structure of PslG from Pseudomonas aeruginosa in complex with mannose [Pseudomonas aeruginosa PAO1]
4EKJ_A 3.29e-08 110 247 130 283
ChainA, Beta-xylosidase [Caulobacter vibrioides]
4M29_A 3.29e-08 110 247 130 283
Structureof a GH39 Beta-xylosidase from Caulobacter crescentus [Caulobacter vibrioides CB15]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
I1S3C6 7.36e-07 50 173 112 243
Endo-1,4-beta-xylanase D OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=XYLD PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000323 0.998874 0.000258 0.000191 0.000172 0.000166

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004501_01691.