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CAZyme Information: MGYG000004547_00003

You are here: Home > Sequence: MGYG000004547_00003

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; ;
CAZyme ID MGYG000004547_00003
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1580 171521.86 4.6089
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004547 2604006 MAG France Europe
Gene Location Start: 1943;  End: 6685  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004547_00003.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 78 336 1.8e-59 0.9861111111111112

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 2.74e-98 45 866 41 758
Probable beta-xylosidase; Provisional
PRK15098 PRK15098 4.51e-63 48 888 26 761
beta-glucosidase BglX.
COG1472 BglX 1.16e-52 75 459 50 387
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 2.65e-37 36 365 20 313
Glycosyl hydrolase family 3 N terminal domain.
pfam01915 Glyco_hydro_3_C 6.49e-26 409 773 2 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUO19977.1 0.0 50 1579 228 1763
AUO18582.1 0.0 7 1578 4 1569
AUO19701.1 0.0 41 1579 29 1556
ADQ79775.1 6.41e-157 46 1144 39 1106
QUT75533.1 5.96e-156 39 914 35 883

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC6_A 9.58e-70 56 874 25 714
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC7_A 9.58e-70 56 874 25 714
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
6Q7I_A 1.18e-68 45 873 41 735
GH3exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]
5A7M_A 6.12e-60 48 873 44 737
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
5AE6_A 6.21e-60 48 873 44 737
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 3.50e-87 42 883 20 851
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
A5JTQ2 1.49e-73 46 873 54 759
Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia OX=36902 GN=Xyl1 PE=1 SV=1
A5JTQ3 2.37e-71 46 865 54 752
Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1
Q9LJN4 2.69e-71 46 882 41 762
Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2
Q9FGY1 4.31e-71 5 873 10 757
Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000285 0.999002 0.000210 0.000175 0.000163 0.000141

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004547_00003.