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CAZyme Information: MGYG000004547_01502
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; ; | |||||||||||
| CAZyme ID | MGYG000004547_01502 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3376; End: 9618 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 565 | 895 | 7e-59 | 0.9027777777777778 |
| CE12 | 1061 | 1333 | 1.6e-48 | 0.9857142857142858 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd01821 | Rhamnogalacturan_acetylesterase_like | 2.41e-43 | 1060 | 1333 | 1 | 196 | Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria. |
| PLN02773 | PLN02773 | 2.29e-34 | 567 | 892 | 16 | 276 | pectinesterase |
| PLN02682 | PLN02682 | 8.88e-32 | 559 | 865 | 70 | 323 | pectinesterase family protein |
| PLN02432 | PLN02432 | 8.54e-26 | 567 | 915 | 22 | 285 | putative pectinesterase |
| PLN02304 | PLN02304 | 4.58e-25 | 567 | 892 | 86 | 348 | probable pectinesterase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADD61757.1 | 6.54e-251 | 192 | 1404 | 198 | 1301 |
| QAV09174.1 | 9.49e-208 | 175 | 1395 | 217 | 1326 |
| QSI02582.1 | 1.60e-192 | 453 | 1396 | 379 | 1275 |
| ADL52345.1 | 1.08e-94 | 256 | 921 | 293 | 872 |
| BAV13168.1 | 1.13e-94 | 256 | 921 | 309 | 888 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5C1E_A | 2.25e-18 | 560 | 897 | 11 | 282 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
| 5C1C_A | 7.45e-18 | 560 | 897 | 11 | 282 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
| 4PMH_A | 8.57e-16 | 568 | 905 | 48 | 354 | Thestructure of rice weevil pectin methyl esterase [Sitophilus oryzae] |
| 1DEO_A | 5.84e-12 | 1062 | 1145 | 3 | 75 | RHAMNOGALACTURONANACETYLESTERASE FROM ASPERGILLUS ACULEATUS AT 1.55 A RESOLUTION WITH SO4 IN THE ACTIVE SITE [Aspergillus aculeatus],1DEX_A RHAMNOGALACTURONAN ACETYLESTERASE FROM ASPERGILLUS ACULEATUS AT 1.9 A RESOLUTION [Aspergillus aculeatus],1K7C_A Rhamnogalacturonan acetylesterase with seven N-linked carbohydrate residues distributed at two N-glycosylation sites refined at 1.12 A resolution [Aspergillus aculeatus],1PP4_A The crystal structure of rhamnogalacturonan acetylesterase in space group P3121 [Aspergillus aculeatus],1PP4_B The crystal structure of rhamnogalacturonan acetylesterase in space group P3121 [Aspergillus aculeatus] |
| 3C1U_A | 5.84e-12 | 1062 | 1145 | 3 | 75 | ChainA, Rhamnogalacturonan acetylesterase [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8VYZ3 | 1.22e-23 | 555 | 892 | 82 | 355 | Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1 |
| Q9LVQ0 | 1.05e-22 | 567 | 884 | 16 | 270 | Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1 |
| A1DBT4 | 3.23e-21 | 547 | 896 | 23 | 306 | Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1 |
| O31528 | 9.65e-21 | 1061 | 1348 | 4 | 215 | Probable rhamnogalacturonan acetylesterase YesY OS=Bacillus subtilis (strain 168) OX=224308 GN=yesY PE=1 SV=1 |
| Q8LPF3 | 2.10e-19 | 559 | 860 | 62 | 300 | Probable pectinesterase 68 OS=Arabidopsis thaliana OX=3702 GN=PME68 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000372 | 0.998864 | 0.000205 | 0.000196 | 0.000174 | 0.000158 |
