logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004569_01859

You are here: Home > Sequence: MGYG000004569_01859

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RF16 sp900556095
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae; RF16; RF16 sp900556095
CAZyme ID MGYG000004569_01859
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
595 MGYG000004569_32|CGC1 66034.62 5.2925
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004569 2389314 MAG France Europe
Gene Location Start: 17360;  End: 19147  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004569_01859.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 86 295 1.4e-63 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.54e-07 24 226 26 235
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.35e-05 100 227 17 151
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT75604.1 2.17e-139 28 532 38 536
QGW28869.1 7.20e-90 23 526 19 457
ALJ01754.1 6.41e-88 24 529 15 461
AFN75574.1 3.49e-87 24 582 256 748
QNA45667.1 2.70e-85 28 530 24 461

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DPF0 2.29e-35 28 532 23 418
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 4.27e-35 28 532 23 418
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 7.98e-35 28 532 23 418
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q0CLG7 2.41e-33 28 528 22 413
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q5B297 2.17e-32 21 528 13 410
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000443 0.998838 0.000203 0.000163 0.000158 0.000150

TMHMM  Annotations      download full data without filtering help

start end
7 29