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CAZyme Information: MGYG000004621_00958

You are here: Home > Sequence: MGYG000004621_00958

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000004621_00958
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
572 62841.59 5.6953
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004621 2838817 MAG France Europe
Gene Location Start: 2131;  End: 3849  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004621_00958.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 268 497 1.6e-22 0.5784615384615385

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.55e-08 146 462 118 436
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02793 PLN02793 4.85e-04 273 323 205 256
Probable polygalacturonase
pfam00295 Glyco_hydro_28 0.005 274 322 114 166
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI63342.1 7.51e-151 32 522 38 529
BCI63341.1 1.04e-134 41 516 271 749
QMV67078.1 1.63e-76 30 508 31 485
QNK57056.1 5.89e-72 46 508 39 485
QJD84920.1 2.21e-69 46 515 34 488

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000515 0.998493 0.000412 0.000210 0.000178 0.000166

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004621_00958.