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CAZyme Information: MGYG000004622_01736
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp900316565 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900316565 | |||||||||||
| CAZyme ID | MGYG000004622_01736 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2963; End: 6358 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 339 | 603 | 1.1e-46 | 0.8854166666666666 |
| PL1 | 778 | 989 | 1.5e-42 | 0.9158415841584159 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 1.13e-35 | 741 | 1059 | 32 | 342 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 2.26e-27 | 785 | 991 | 1 | 190 | Amb_all domain. |
| COG4677 | PemB | 5.37e-18 | 322 | 631 | 75 | 405 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| pfam00544 | Pec_lyase_C | 5.24e-15 | 801 | 987 | 35 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| PLN02745 | PLN02745 | 6.65e-14 | 327 | 530 | 286 | 484 | Putative pectinesterase/pectinesterase inhibitor |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AGB28243.1 | 2.26e-107 | 323 | 707 | 931 | 1319 |
| VEH16322.1 | 9.07e-93 | 328 | 710 | 1027 | 1418 |
| QYR11586.1 | 3.43e-82 | 735 | 1062 | 40 | 360 |
| QSW89705.1 | 4.56e-77 | 745 | 1060 | 59 | 362 |
| AOC93238.1 | 3.21e-76 | 745 | 1060 | 60 | 363 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1PCL_A | 1.04e-18 | 742 | 998 | 7 | 287 | ChainA, PECTATE LYASE E [Dickeya chrysanthemi] |
| 2NSP_A | 9.25e-18 | 346 | 633 | 26 | 339 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 3ZSC_A | 2.93e-17 | 751 | 964 | 20 | 214 | Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
| 1VBL_A | 2.72e-16 | 735 | 988 | 8 | 331 | Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
| 5AMV_A | 3.16e-15 | 802 | 985 | 120 | 323 | Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9WYR4 | 1.83e-20 | 751 | 964 | 47 | 241 | Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1 |
| B1L969 | 3.21e-20 | 751 | 964 | 45 | 239 | Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1 |
| Q0CBV0 | 5.77e-20 | 741 | 1011 | 34 | 277 | Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1 |
| Q2TZY0 | 1.15e-18 | 731 | 1011 | 23 | 278 | Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1 |
| B8NBC2 | 1.15e-18 | 731 | 1011 | 23 | 278 | Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.002628 | 0.996369 | 0.000266 | 0.000247 | 0.000228 | 0.000233 |