You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000004640_00991
You are here: Home > Sequence: MGYG000004640_00991
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp900551055 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900551055 | |||||||||||
| CAZyme ID | MGYG000004640_00991 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 4911; End: 6473 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 131 | 340 | 7e-42 | 0.8415841584158416 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 1.57e-46 | 23 | 427 | 12 | 344 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 8.39e-38 | 134 | 342 | 12 | 190 | Amb_all domain. |
| pfam00544 | Pec_lyase_C | 7.11e-24 | 134 | 318 | 30 | 190 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT75310.1 | 5.42e-114 | 42 | 462 | 23 | 423 |
| QNH62939.1 | 6.64e-36 | 63 | 427 | 77 | 378 |
| QHJ07062.1 | 2.36e-34 | 44 | 427 | 55 | 369 |
| SCA88301.1 | 2.60e-31 | 26 | 427 | 19 | 334 |
| QAT67521.1 | 2.60e-31 | 26 | 427 | 19 | 334 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3ZSC_A | 3.06e-25 | 61 | 427 | 17 | 331 | Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
| 3VMV_A | 2.43e-23 | 61 | 343 | 10 | 251 | Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
| 5AMV_A | 9.50e-22 | 222 | 427 | 191 | 398 | Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168] |
| 1BN8_A | 1.16e-21 | 222 | 427 | 212 | 419 | BacillusSubtilis Pectate Lyase [Bacillus subtilis] |
| 2NZM_A | 1.72e-21 | 222 | 427 | 191 | 398 | ChainA, Pectate lyase [Bacillus subtilis],2O04_A Chain A, Pectate lyase [Bacillus subtilis],2O0V_A Chain A, Pectate lyase [Bacillus subtilis],2O0W_A Chain A, Pectate lyase [Bacillus subtilis],2O17_A Chain A, Pectate lyase [Bacillus subtilis],2O1D_A Chain A, Pectate lyase [Bacillus subtilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q65DC2 | 1.88e-30 | 42 | 427 | 41 | 339 | Pectate trisaccharide-lyase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=BLi04129 PE=3 SV=1 |
| B1B6T1 | 1.88e-30 | 42 | 427 | 41 | 339 | Pectate trisaccharide-lyase OS=Bacillus sp. OX=1409 GN=pel PE=1 SV=1 |
| Q8GCB2 | 1.88e-30 | 42 | 427 | 41 | 339 | Pectate trisaccharide-lyase OS=Bacillus licheniformis OX=1402 GN=pelA PE=1 SV=1 |
| B1L969 | 1.33e-24 | 17 | 427 | 5 | 356 | Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1 |
| Q9WYR4 | 2.52e-24 | 17 | 427 | 7 | 358 | Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000491 | 0.998478 | 0.000399 | 0.000215 | 0.000202 | 0.000188 |
