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CAZyme Information: MGYG000004643_00541

You are here: Home > Sequence: MGYG000004643_00541

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_R sp003526845
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Eubacterium_R; Eubacterium_R sp003526845
CAZyme ID MGYG000004643_00541
CAZy Family GT14
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
307 MGYG000004643_1|CGC6 35688.34 6.4062
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004643 1975847 MAG Germany Europe
Gene Location Start: 566403;  End: 567326  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004643_00541.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT14 5 255 3.6e-56 0.96

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02485 Branch 4.23e-20 5 251 2 231
Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme. I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. This is a fmmily of glycosyl-transferases that are Type II membrane proteins that are found in the endoplasmic reticulum (ER) and Golgi apparatus.
PLN03183 PLN03183 6.43e-05 179 295 256 370
acetylglucosaminyltransferase family protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AMN32012.1 1.36e-90 3 292 4 296
QUD73698.1 1.36e-90 3 292 4 296
ALV21388.1 1.48e-83 1 292 1 297
QQP69399.1 1.48e-83 1 292 1 297
QNM12695.1 8.02e-80 4 293 2 286

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9EPI0 3.48e-12 5 283 235 516
Xylosyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Xylt2 PE=2 SV=1
P97402 1.53e-06 5 277 96 371
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase OS=Mus musculus OX=10090 GN=Gcnt2 PE=2 SV=2
Q8N0V5 3.65e-06 5 277 98 372
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase OS=Homo sapiens OX=9606 GN=GCNT2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000060 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004643_00541.