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CAZyme Information: MGYG000004698_01162

You are here: Home > Sequence: MGYG000004698_01162

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp000436695
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp000436695
CAZyme ID MGYG000004698_01162
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
464 MGYG000004698_28|CGC1 51542.91 7.8798
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004698 3424026 MAG Denmark Europe
Gene Location Start: 8668;  End: 10062  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004698_01162.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 76 443 1.2e-75 0.96

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 6.28e-71 32 363 64 398
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 2.04e-20 47 424 20 357
Probable polygalacturonase At3g15720
PLN02793 PLN02793 1.52e-17 3 424 16 394
Probable polygalacturonase
pfam00295 Glyco_hydro_28 4.31e-14 150 365 54 241
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 2.25e-13 31 424 45 408
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY35504.1 2.30e-244 31 463 28 460
AND21958.1 3.79e-236 33 463 11 441
AII62903.1 8.48e-236 33 463 33 463
QUT83816.1 8.48e-236 33 463 33 463
QJR67967.1 8.48e-236 33 463 33 463

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 9.77e-87 25 424 2 410
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 1.61e-82 53 431 47 432
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 7.22e-38 33 424 43 424
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q9LW07 3.53e-23 47 424 20 357
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
P15922 1.06e-18 35 457 137 594
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
P27644 5.51e-16 207 413 25 249
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
P43212 1.48e-14 49 424 57 400
Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000226 0.999227 0.000148 0.000137 0.000127 0.000126

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004698_01162.