logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004741_00024

You are here: Home > Sequence: MGYG000004741_00024

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes; Bacilli; RF39; UBA660; CAG-877;
CAZyme ID MGYG000004741_00024
CAZy Family GH108
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
142 16520.74 7.9484
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004741 1179606 MAG Sweden Europe
Gene Location Start: 18202;  End: 18630  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004741_00024.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH108 9 109 5.4e-17 0.9651162790697675

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05838 Glyco_hydro_108 3.04e-20 15 109 8 86
Glycosyl hydrolase 108. This family acts as a lysozyme (N-acetylmuramidase), EC:3.2.1.17. It contains a conserved EGGY motif near the N-terminus, the glutamic acid within this motif is essential for catalytic activity. In bacteria, it may activate the secretion of large proteins via the breaking and rearrangement of the peptidoglycan layer during secretion. It is frequently found at the N-terminus of proteins containing a C-terminal pfam09374 domain.
cd13926 N-acetylmuramidase_GH108 1.59e-11 2 109 1 91
N-acetylmuramidase domain of the glycosyl hydrolase 108 family. This domain acts as a lysozyme (N-acetylmuramidase), EC:3.2.1.17. It contains a conserved EGGY motif near the N-terminus, the glutamic acid within this motif is essential for catalytic activity. In bacteria, it may activate the secretion of large proteins via the breaking and rearrangement of the peptidoglycan layer during secretion. It is frequently found at the N-terminus of proteins containing a peptidoglycan binding domain.
COG3926 ZliS 7.67e-10 15 128 16 111
Lysozyme family protein [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOR56522.1 2.69e-104 1 142 1 142
QPD07323.1 2.69e-104 1 142 1 142
QOR56602.1 3.82e-104 1 142 1 142
QIN93321.1 1.10e-103 1 142 1 142
QOR56442.1 1.56e-103 1 142 1 142

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004741_00024.