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CAZyme Information: MGYG000004748_00243

You are here: Home > Sequence: MGYG000004748_00243

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000004748_00243
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
458 50036.58 7.8488
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004748 4696076 MAG China Asia
Gene Location Start: 320690;  End: 322066  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004748_00243.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 50 390 2.3e-67 0.9323076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.20e-61 26 315 83 401
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02188 PLN02188 4.21e-18 25 317 36 315
polygalacturonase/glycoside hydrolase family protein
PLN02218 PLN02218 1.17e-17 19 393 61 429
polygalacturonase ADPG
PLN03003 PLN03003 1.80e-16 26 317 24 296
Probable polygalacturonase At3g15720
PLN03010 PLN03010 3.59e-16 23 317 44 315
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT90415.1 5.48e-314 1 458 1 457
ALJ58472.1 5.48e-314 1 458 1 457
QDO71140.1 3.17e-313 1 458 1 457
ACU03921.1 6.88e-237 26 452 28 454
ADY54155.1 2.99e-232 24 451 23 450

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 1.12e-32 26 440 45 452
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 9.52e-27 27 381 29 407
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
4MXN_A 4.01e-22 23 224 19 212
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
2UVE_A 7.51e-16 27 312 158 490
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
3ZPP_A 1.39e-09 27 197 25 190
Structureof the Streptococcus pneumoniae surface protein and adhesin PfbA [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 5.69e-26 31 386 68 426
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q39786 5.87e-19 10 353 14 342
Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1
Q39766 5.87e-19 28 414 32 398
Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1
P35338 8.09e-19 23 312 38 350
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1
P26216 8.63e-18 23 312 38 350
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000219 0.999102 0.000181 0.000166 0.000164 0.000153

TMHMM  Annotations      download full data without filtering help

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