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CAZyme Information: MGYG000004779_00544

You are here: Home > Sequence: MGYG000004779_00544

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1397 sp900551425
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UMGS1397; UMGS1397 sp900551425
CAZyme ID MGYG000004779_00544
CAZy Family GT2
CAZyme Description D-alanine--poly(phosphoribitol) ligase subunit 1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2494 285649.63 5.2698
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004779 2688004 MAG China Asia
Gene Location Start: 134094;  End: 141578  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004779_00544.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12316 PRK12316 0.0 155 2294 443 2580
peptide synthase; Provisional
PRK12467 PRK12467 0.0 1095 2294 972 2160
peptide synthase; Provisional
PRK12316 PRK12316 0.0 11 2298 2804 5140
peptide synthase; Provisional
cd05930 A_NRPS 1.64e-180 1738 2210 1 444
The adenylation domain of nonribosomal peptide synthetases (NRPS). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
cd12114 A_NRPS_TlmIV_like 2.23e-174 1738 2210 1 477
The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the TLM biosynthetic gene cluster from Streptoalloteichus that consists of nine NRPS genes; the N-terminal module of TlmVI (NRPS-5) and the starter module of BlmVI (NRPS-5) are comprised of the acyl CoA ligase (AL) and acyl carrier protein (ACP)-like domains, which are thought to be involved in the biosynthesis of the beta-aminoalaninamide moiety.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QND46664.1 1.93e-168 174 2317 960 2677
AXG46165.1 2.00e-124 152 1648 467 1952
AXG41638.1 2.00e-124 152 1648 467 1952
AWK40831.1 2.00e-124 152 1648 467 1952
AFZ04852.1 6.43e-96 1454 2300 321 1186

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6MFZ_A 2.72e-162 228 2306 211 1807
Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis]
6MFY_A 2.02e-148 228 2210 211 1712
Crystalstructure of a 5-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis],6MG0_A Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis],6MG0_B Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis]
7LY7_A 3.43e-136 1305 2270 51 991
ChainA, BmdB, Bacillamide NRPS [Thermoactinomyces vulgaris]
7LY4_E 3.52e-136 1305 2270 51 991
ChainE, BmdB, bacillamide NRPS [Thermoactinomyces vulgaris]
5WMM_A 1.34e-121 189 1137 20 924
Crystalstructure of an adenylation domain interrupted by a methylation domain (AMA4) from nonribosomal peptide synthetase TioS [Micromonospora sp. ML1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9R9I9 2.22e-215 52 2275 66 2332
Mycosubtilin synthase subunit C OS=Bacillus subtilis OX=1423 GN=mycC PE=3 SV=1
Q70LM5 8.12e-201 54 2297 3899 6212
Linear gramicidin synthase subunit C OS=Brevibacillus parabrevis OX=54914 GN=lgrC PE=3 SV=1
P94459 6.97e-196 14 2297 1242 3104
Plipastatin synthase subunit D OS=Bacillus subtilis (strain 168) OX=224308 GN=ppsD PE=1 SV=2
Q9R9J0 1.59e-194 33 2324 48 2374
Mycosubtilin synthase subunit B OS=Bacillus subtilis OX=1423 GN=mycB PE=3 SV=1
Q70LM6 2.73e-193 30 2297 1283 3612
Linear gramicidin synthase subunit B OS=Brevibacillus parabrevis OX=54914 GN=lgrB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999931 0.000059 0.000000 0.000000 0.000000 0.000003

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004779_00544.