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CAZyme Information: MGYG000004797_02383
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phocaeicola sartorii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sartorii | |||||||||||
| CAZyme ID | MGYG000004797_02383 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 7797; End: 9179 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 52 | 392 | 1.5e-67 | 0.9353846153846154 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.49e-63 | 28 | 317 | 83 | 401 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02188 | PLN02188 | 8.88e-20 | 4 | 319 | 5 | 315 | polygalacturonase/glycoside hydrolase family protein |
| PLN02218 | PLN02218 | 6.46e-17 | 11 | 319 | 51 | 350 | polygalacturonase ADPG |
| pfam12708 | Pectate_lyase_3 | 1.54e-14 | 28 | 289 | 2 | 211 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
| PLN03010 | PLN03010 | 6.23e-14 | 28 | 319 | 47 | 315 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT90415.1 | 6.10e-284 | 1 | 460 | 1 | 457 |
| ALJ58472.1 | 6.10e-284 | 1 | 460 | 1 | 457 |
| QDO71140.1 | 1.01e-282 | 4 | 460 | 1 | 457 |
| ACU03921.1 | 6.30e-231 | 24 | 460 | 24 | 461 |
| ADY54155.1 | 2.50e-229 | 27 | 453 | 24 | 450 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 1.61e-27 | 28 | 281 | 45 | 325 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 6.44e-23 | 29 | 239 | 29 | 267 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 4MXN_A | 4.07e-22 | 19 | 255 | 13 | 241 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
| 2UVE_A | 1.73e-14 | 29 | 138 | 158 | 273 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 3ZPP_A | 5.99e-10 | 21 | 180 | 19 | 170 | Structureof the Streptococcus pneumoniae surface protein and adhesin PfbA [Streptococcus pneumoniae TIGR4] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q39786 | 4.62e-24 | 9 | 355 | 10 | 342 | Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1 |
| Q39766 | 8.52e-24 | 9 | 355 | 10 | 342 | Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1 |
| A7PZL3 | 3.52e-22 | 27 | 388 | 62 | 426 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P48978 | 1.22e-15 | 18 | 371 | 89 | 436 | Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1 |
| P26216 | 1.75e-14 | 27 | 394 | 40 | 388 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000249 | 0.999018 | 0.000216 | 0.000174 | 0.000168 | 0.000158 |