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CAZyme Information: MGYG000004799_00883

You are here: Home > Sequence: MGYG000004799_00883

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Schaedlerella sp900765975
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Schaedlerella; Schaedlerella sp900765975
CAZyme ID MGYG000004799_00883
CAZy Family GH141
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1701 188345.81 4.5116
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004799 2888994 MAG China Asia
Gene Location Start: 16726;  End: 21831  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004799_00883.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH141 46 578 4e-58 0.9886148007590133

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00987 PDZ_serine_protease 7.42e-10 736 816 2 82
PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.
pfam13229 Beta_helix 1.03e-04 334 494 1 136
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13180 PDZ_2 1.11e-04 758 816 6 64
PDZ domain.
PRK08475 PRK08475 4.49e-04 1492 1597 57 165
F0F1 ATP synthase subunit B; Validated
TIGR01612 235kDa-fam 4.73e-04 1488 1663 1059 1285
reticulocyte binding/rhoptry protein. This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWW32784.1 6.38e-122 46 799 32 772
AEE97817.1 5.85e-29 46 708 440 1097
BAU63437.1 1.93e-27 48 711 58 730
BCG53796.1 4.09e-27 48 478 36 461
AFZ35556.1 7.39e-27 35 711 36 712

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQP_A 7.81e-10 46 576 26 590
Glycosidehydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_B Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_C Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_D Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_E Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_F Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_G Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_H Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000444 0.998674 0.000274 0.000207 0.000196 0.000168

TMHMM  Annotations      download full data without filtering help

start end
1677 1695