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CAZyme Information: MGYG000004826_00708
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS1810 sp900555295 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; UMGS1810; UMGS1810; UMGS1810; UMGS1810 sp900555295 | |||||||||||
| CAZyme ID | MGYG000004826_00708 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 7850; End: 9679 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 27 | 307 | 6.3e-43 | 0.8338461538461538 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.63e-08 | 28 | 340 | 190 | 491 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03010 | PLN03010 | 5.41e-06 | 60 | 301 | 141 | 374 | polygalacturonase |
| PLN03003 | PLN03003 | 2.65e-05 | 49 | 164 | 104 | 221 | Probable polygalacturonase At3g15720 |
| PLN02793 | PLN02793 | 3.00e-04 | 81 | 248 | 178 | 343 | Probable polygalacturonase |
| pfam00295 | Glyco_hydro_28 | 0.001 | 81 | 297 | 86 | 304 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BCJ93866.1 | 2.79e-184 | 1 | 609 | 95 | 716 |
| BCJ98361.1 | 1.18e-176 | 17 | 606 | 112 | 713 |
| APA66227.1 | 1.93e-40 | 17 | 326 | 159 | 497 |
| SDS06655.1 | 4.46e-40 | 17 | 326 | 172 | 510 |
| AWW32777.1 | 3.01e-38 | 17 | 325 | 161 | 499 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999974 | 0.000050 | 0.000026 | 0.000000 | 0.000000 | 0.000000 |