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CAZyme Information: MGYG000004831_01297

You are here: Home > Sequence: MGYG000004831_01297

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species ER4 sp900552375
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; ER4; ER4 sp900552375
CAZyme ID MGYG000004831_01297
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
544 59496.17 4.9145
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004831 1443579 MAG Denmark Europe
Gene Location Start: 282;  End: 1916  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004831_01297.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 225 524 1.3e-30 0.8412162162162162

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 6.00e-30 315 525 104 304
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 6.14e-19 315 525 208 409
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
pfam00704 Glyco_hydro_18 1.03e-16 315 521 105 302
Glycosyl hydrolases family 18.
smart00636 Glyco_18 3.28e-15 313 521 106 329
Glyco_18 domain.
NF033190 inl_like_NEAT_1 4.13e-15 24 200 581 753
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNL45580.1 9.94e-157 8 528 6 540
QOX64072.1 1.40e-150 23 544 28 565
QIB69198.1 8.10e-147 25 543 34 554
QHI71217.1 9.18e-146 23 543 32 554
BAK99492.1 1.56e-142 7 527 28 558

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 5.53e-14 303 525 100 310
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
5JH8_A 1.11e-09 315 524 105 300
Crystalstructure of chitinase from Chromobacterium violaceum ATCC 12472 [Chromobacterium violaceum ATCC 12472]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P37531 1.60e-14 283 544 184 428
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
O05495 8.44e-14 303 525 192 402
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
P38536 1.26e-12 31 195 1687 1857
Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P38535 1.32e-11 31 197 913 1085
Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
Q9ZES5 1.08e-10 19 191 28 203
S-layer protein OS=Bacillus thuringiensis subsp. finitimus OX=29337 GN=ctc PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000536 0.998386 0.000237 0.000299 0.000271 0.000245

TMHMM  Annotations      download full data without filtering help

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