dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000004837_00456

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Basic Information help

Species

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pasteurellaceae; Haemophilus_D;

CAZyme ID

MGYG000004837_00456

CAZy Family

GH2

CAZyme Description

Beta-galactosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1008	MGYG000004837_14\|CGC1	115829.5	5.7263

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004837	1914208	MAG	China	Asia

Gene Location

Start: 15691; End: 18717 Strand: +

Full Sequence Download help

Enzyme Prediction help

EC	3.2.1.23

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH2	31	894	1.6e-201	0.976063829787234

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK09525	lacZ	0.0	5	1006	15	1025	beta-galactosidase.
PRK10340	ebgA	0.0	8	993	5	985	cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250	LacZ	1.83e-139	39	897	7	808	Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836	Glyco_hydro_2_C	1.52e-88	300	614	1	299	Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038	Bgal_small_N	1.62e-86	745	1005	6	272	Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits help

Hit ID	Query Start	Query End	Hit Start	Hit End
QOR07972.1	1	1007	1	1007
QOR24638.1	1	1008	1	1008
QOR06130.1	1	1008	1	1008
CBW16084.1	1	1008	1	1008
QOR19188.1	1	1008	1	1008

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6SD0_A	6.49e-171	3	1008	1	983	Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
6S6Z_A	1.24e-170	4	1008	1	982	Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
1PX3_A	1.64e-158	5	1003	14	1018	ChainA, beta-galactosidase [Escherichia coli],1PX3_B Chain B, beta-galactosidase [Escherichia coli],1PX3_C Chain C, beta-galactosidase [Escherichia coli],1PX3_D Chain D, beta-galactosidase [Escherichia coli],1PX4_A Chain A, beta-galactosidase [Escherichia coli],1PX4_B Chain B, beta-galactosidase [Escherichia coli],1PX4_C Chain C, beta-galactosidase [Escherichia coli],1PX4_D Chain D, beta-galactosidase [Escherichia coli]
3MUY_1	2.29e-158	5	1003	14	1018	Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]
4DUV_A	3.39e-158	5	1003	43	1047	E.coli (lacZ) beta-galactosidase (G974A) 2-deoxy-galactosyl-enzyme and bis-Tris complex [Escherichia coli K-12],4DUV_B E. coli (lacZ) beta-galactosidase (G974A) 2-deoxy-galactosyl-enzyme and bis-Tris complex [Escherichia coli K-12],4DUV_C E. coli (lacZ) beta-galactosidase (G974A) 2-deoxy-galactosyl-enzyme and bis-Tris complex [Escherichia coli K-12],4DUV_D E. coli (lacZ) beta-galactosidase (G974A) 2-deoxy-galactosyl-enzyme and bis-Tris complex [Escherichia coli K-12],4DUW_A E. coli (lacZ) beta-galactosidase (G974A) in complex with allolactose [Escherichia coli K-12],4DUW_B E. coli (lacZ) beta-galactosidase (G974A) in complex with allolactose [Escherichia coli K-12],4DUW_C E. coli (lacZ) beta-galactosidase (G974A) in complex with allolactose [Escherichia coli K-12],4DUW_D E. coli (lacZ) beta-galactosidase (G974A) in complex with allolactose [Escherichia coli K-12]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P70753	0.0	1	999	1	991	Beta-galactosidase OS=Actinobacillus pleuropneumoniae OX=715 GN=lacZ PE=3 SV=1
O33815	8.15e-236	5	1006	5	992	Beta-galactosidase OS=Staphylococcus xylosus OX=1288 GN=lacZ PE=3 SV=1
Q56307	3.55e-170	3	1008	1	983	Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847	7.96e-169	4	982	18	1006	Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
B7N8Q1	1.21e-158	5	1003	15	1019	Beta-galactosidase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) OX=585056 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000018	0.000014	0.000001	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000004837_00456.