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CAZyme Information: MGYG000004875_00866

You are here: Home > Sequence: MGYG000004875_00866

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp002232035
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp002232035
CAZyme ID MGYG000004875_00866
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
855 MGYG000004875_8|CGC1 92941.68 4.5132
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004875 2163230 MAG China Asia
Gene Location Start: 4571;  End: 7138  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004875_00866.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 28 836 6.8e-68 0.9138349514563107

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 0.004 393 563 566 732
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZH68834.1 0.0 1 855 1 855
ATP54541.1 0.0 13 855 4 842
QNM10672.1 5.34e-316 1 855 1 826
AGF57028.1 4.85e-250 8 855 7 839
ANY67834.1 3.46e-208 1 855 1 871

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004875_00866.