dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000004879_02782

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Basic Information help

Species

Lineage

Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Clostridium_N;

CAZyme ID

MGYG000004879_02782

CAZy Family

CE8

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2463	MGYG000004879_81\|CGC1	264915.99	4.1564

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004879	3926800	MAG	China	Asia

Gene Location

Start: 9105; End: 16496 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000004879_02782.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
CE8	1364	1645	1.3e-75	0.9513888888888888
PL1	1788	2028	4.4e-39	0.8316831683168316

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG4677	PemB	1.33e-35	1352	1634	87	389	Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095	Pectinesterase	4.97e-35	1366	1623	12	265	Pectinesterase.
PLN02432	PLN02432	6.85e-30	1366	1647	23	286	putative pectinesterase
PLN02990	PLN02990	1.10e-29	1366	1660	271	570	Probable pectinesterase/pectinesterase inhibitor
PLN02773	PLN02773	9.29e-29	1366	1623	17	269	pectinesterase

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ADD62022.1	0.0	835	2340	725	2324
QEH70392.1	0.0	390	2126	100	1753
ACZ98653.1	0.0	844	2126	61	1348
ACR72234.1	9.89e-124	891	1665	294	1084
QJS18636.1	2.22e-85	1695	2126	243	673

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GT5_A	6.43e-76	1693	2126	3	446	Structuralbasis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602],5GT5_B Structural basis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602]
2NSP_A	1.32e-30	1341	1651	2	339	ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
3UW0_A	3.76e-27	1366	1634	44	345	Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
2NTB_A	3.71e-26	1341	1651	2	339	Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]
1QJV_A	3.71e-26	1341	1651	2	339	ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
D3JTC2	1.31e-71	1693	2029	32	370	Pectate lyase B OS=Paenibacillus amylolyticus OX=1451 GN=pelB PE=1 SV=1
Q43043	6.18e-29	1292	1627	6	327	Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1
O04887	1.22e-25	1367	1651	214	500	Pectinesterase 2 OS=Citrus sinensis OX=2711 GN=PECS-2.1 PE=2 SV=1
Q9FJ21	2.12e-25	1366	1659	270	568	Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana OX=3702 GN=PME58 PE=2 SV=1
P0C1A8	2.34e-25	1341	1651	26	363	Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.008237	0.892523	0.096908	0.001723	0.000322	0.000251

TMHMM Annotations download full data without filtering help

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