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CAZyme Information: MGYG000004880_01554

You are here: Home > Sequence: MGYG000004880_01554

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000004880_01554
CAZy Family CE8
CAZyme Description Pectinesterase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
326 MGYG000004880_15|CGC1 37078.19 8.6393
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004880 2890596 MAG Spain Europe
Gene Location Start: 25940;  End: 26920  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004880_01554.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 31 315 7.9e-103 0.9826388888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01095 Pectinesterase 8.07e-82 32 311 3 290
Pectinesterase.
PLN02773 PLN02773 1.31e-75 31 312 7 292
pectinesterase
COG4677 PemB 1.46e-64 28 316 80 402
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02197 PLN02197 1.48e-63 30 310 276 562
pectinesterase
PLN02432 PLN02432 3.45e-63 31 322 13 291
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QVJ81978.1 4.62e-184 7 324 5 322
ADE82952.1 4.62e-184 7 324 5 322
BCS84477.1 7.03e-168 3 325 2 324
QJR97878.1 1.10e-167 13 324 4 318
AGB28242.1 5.07e-158 6 325 5 324

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 2.11e-43 31 298 9 281
Pectinmethylesterase from Carrot [Daucus carota]
1XG2_A 1.74e-40 32 298 6 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
5C1E_A 2.37e-39 31 295 11 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 1.28e-38 31 295 11 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2NSP_A 2.82e-31 41 324 18 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 6.84e-53 33 307 9 287
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
P41510 3.48e-52 30 310 272 558
Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus OX=3708 GN=BP19 PE=2 SV=1
O80722 2.69e-51 32 300 278 554
Pectinesterase 4 OS=Arabidopsis thaliana OX=3702 GN=PME4 PE=2 SV=1
Q5MFV6 5.22e-51 30 310 276 562
Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana OX=3702 GN=VGDH2 PE=2 SV=2
Q5MFV8 8.06e-51 30 298 283 559
Pectinesterase 5 OS=Arabidopsis thaliana OX=3702 GN=PME5 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000522 0.998659 0.000186 0.000242 0.000190 0.000173

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004880_01554.