Species | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; UBA4716; | |||||||||||
CAZyme ID | MGYG000004881_00479 | |||||||||||
CAZy Family | GH4 | |||||||||||
CAZyme Description | Alpha-galacturonidase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 4192; End: 5739 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH4 | 64 | 244 | 1.4e-54 | 0.9888268156424581 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
cd05297 | GH4_alpha_glucosidase_galactosidase | 1.32e-149 | 63 | 503 | 1 | 423 | Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture |
COG1486 | CelF | 2.38e-102 | 63 | 515 | 4 | 441 | Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase [Carbohydrate transport and metabolism]. |
PRK15076 | PRK15076 | 1.11e-64 | 62 | 514 | 1 | 431 | alpha-galactosidase; Provisional |
pfam02056 | Glyco_hydro_4 | 1.47e-54 | 64 | 245 | 1 | 181 | Family 4 glycosyl hydrolase. |
cd05197 | GH4_glycoside_hydrolases | 3.15e-46 | 63 | 503 | 1 | 423 | Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
ADZ85649.1 | 4.35e-220 | 53 | 515 | 1 | 463 |
QEH67112.1 | 1.76e-219 | 53 | 515 | 1 | 463 |
AFK85236.1 | 2.07e-216 | 53 | 510 | 1 | 458 |
SNX53414.1 | 5.19e-214 | 53 | 510 | 1 | 458 |
ADL69889.1 | 4.54e-213 | 53 | 510 | 1 | 458 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3FEF_A | 7.42e-155 | 61 | 501 | 4 | 434 | Crystalstructure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis],3FEF_B Crystal structure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis],3FEF_C Crystal structure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis],3FEF_D Crystal structure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis] |
5C3M_A | 7.63e-26 | 134 | 515 | 77 | 439 | Crystalstructure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5C3M_B Crystal structure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5C3M_C Crystal structure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5C3M_D Crystal structure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus] |
1S6Y_A | 5.22e-24 | 134 | 515 | 80 | 442 | 2.3Acrystal structure of phospho-beta-glucosidase [Geobacillus stearothermophilus] |
1U8X_X | 4.24e-19 | 59 | 512 | 25 | 463 | CrystalStructure Of Glva From Bacillus Subtilis, A Metal-requiring, Nad-dependent 6-phospho-alpha-glucosidase [Bacillus subtilis] |
6DUX_A | 2.77e-17 | 134 | 512 | 77 | 441 | ChainA, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae],6DUX_B Chain B, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae],6DVV_A Chain A, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae],6DVV_B Chain B, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
I3VRU1 | 4.14e-217 | 53 | 510 | 1 | 458 | Alpha-galacturonidase OS=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) OX=1094508 GN=Tsac_0200 PE=1 SV=1 |
D3T426 | 2.16e-187 | 53 | 510 | 1 | 450 | Alpha-galacturonidase OS=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) OX=580331 GN=Thit_1733 PE=1 SV=1 |
A9KTB9 | 5.60e-176 | 53 | 510 | 1 | 460 | Alpha-galacturonidase OS=Lachnoclostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) OX=357809 GN=Cphy_3396 PE=1 SV=1 |
P39130 | 7.26e-159 | 61 | 503 | 8 | 440 | Alpha-galacturonidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lplD PE=1 SV=2 |
O34645 | 1.09e-41 | 64 | 513 | 3 | 431 | Alpha-galactosidase OS=Bacillus subtilis (strain 168) OX=224308 GN=melA PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000035 | 0.000003 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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