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capsule polysaccharide degradation
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Capsule polysaccharide, typically composed of repeating monosaccharides joined by glycosidic linkages, is commonly found on the bacteria cell surface as a capsule structure layer. It is located outside the outer membrane of gram-negative cells and the peptidoglycan layer of gram-positive cells.
References
Reckseidler-Zenteno, S. L. (2012). Capsular Polysaccharides Produced by the Bacterial Pathogen Burkholderia pseudomallei. In (Ed.), The Complex World of Polysaccharides. IntechOpen. Click here to redirect detail information.
Roberts I. S. (1996). The biochemistry and genetics of capsular polysaccharide production in bacteria. Annual review of microbiology, 50, 285–315. Click here to redirect detail information.
CAZyme Gene Cluster:
| Substrate | Genome_ID | CGC_ID | CGC_Content | PUL_ID | Species Name |
|---|---|---|---|---|---|
| capsule polysaccharide degradation | MGYG000000005 | MGYG000000005_4|CGC5 |
2.A.38.4.5,null,PL0|PL12,null,GT0,9.B.18.1.2,8.A.3.3.4
|
PUL0248 | Terrisporobacter glycolicus |
| capsule polysaccharide degradation | MGYG000000013 | MGYG000000013_16|CGC2 |
GH31,GH66,null,8.A.46.1.5,1.B.14.6.1,null,null,PL37
|
PUL0205 | Bacteroides sp902362375 |
| capsule polysaccharide degradation | MGYG000000029 | MGYG000000029_9|CGC2 |
1.B.14.6.1,8.A.46.1.3,null,GH66,GH31
|
PUL0205 | Bacteroides finegoldii |
| capsule polysaccharide degradation | MGYG000000043 | MGYG000000043_32|CGC1 |
3.A.1.27.4,3.A.1.27.2,1.B.42.1.2,null,8.A.46.1.1,1.B.14.6.1,GH97,GH13
|
PUL0204 | Phocaeicola sp900066455 |
| capsule polysaccharide degradation | MGYG000000105 | MGYG000000105_3|CGC11 |
GH31,null,1.B.14.6.1
|
PUL0205 | Bacteroides clarus |
| capsule polysaccharide degradation | MGYG000000119 | MGYG000000119_19|CGC1 |
GH31,9.B.28.1.2,GH31,GH31,3.A.1.1.6,3.A.1.1.44,SBP_bac_1,HTH_AraC+HTH_AraC,8.A.59.2.1
|
PUL0205 | Blautia sp000432195 |
| capsule polysaccharide degradation | MGYG000000123 | MGYG000000123_6|CGC6 |
4.D.1.3.3,null,GntR,3.A.1.132.6,null,null,GH31,9.B.28.1.8,GH31,GH31,3.A.1.1.6,3.A.1.1.19,SBP_bac_1,HTH_AraC+HTH_AraC,8.A.59.2.1
|
PUL0205 | Blautia sp001304935 |
| capsule polysaccharide degradation | MGYG000000158 | MGYG000000158_1|CGC1 |
PL0|PL12,null,9.B.18.1.3
|
PUL0248 | Collinsella sp003436275 |
| capsule polysaccharide degradation | MGYG000000196 | MGYG000000196_15|CGC4 |
GH51,null,GH43,null,GH2,null,1.B.14.6.1,8.A.46.1.5,null,GH66,GH31,GH31,null,null,CBM66|GH32|3.2.1.26|3.2.1.80|3.2.1.64|CBM38
|
PUL0205 | Bacteroides thetaiotaomicron |
| capsule polysaccharide degradation | MGYG000000196 | MGYG000000196_1|CGC2 |
GH13,GH97,1.B.14.6.1,8.A.46.1.1,null,null,GH13|GH13_36|CBM58
|
PUL0204 | Bacteroides thetaiotaomicron |
| capsule polysaccharide degradation | MGYG000000260 | MGYG000000260_2|CGC3 |
9.B.18.1.3,null,PL12|PL0
|
PUL0248 | Collinsella sp003469205 |
| capsule polysaccharide degradation | MGYG000000305 | MGYG000000305_1|CGC2 |
2.A.7.18.4,GH31,null,null,8.A.46.1.5,1.B.14.6.1,GH36
|
PUL0205 | RF16 sp900542355 |
| capsule polysaccharide degradation | MGYG000000359 | MGYG000000359_8|CGC4 |
GT2,GT2,null,null,9.B.18.1.3,GT4,PL0|PL12
|
PUL0248 | |
| capsule polysaccharide degradation | MGYG000000568 | MGYG000000568_48|CGC1 |
1.B.14.6.1,8.A.46.1.3,null,GH66,GH31
|
PUL0205 | CAG-279 sp900544305 |
| capsule polysaccharide degradation | MGYG000000644 | MGYG000000644_4|CGC1 |
1.B.14.6.1,8.A.46.1.5,GH31|CBM32
|
PUL0205 | Prevotella sp900546535 |
| capsule polysaccharide degradation | MGYG000000675 | MGYG000000675_59|CGC1 |
1.B.14.6.1,GH130,2.A.1.33.2,GH130,HTH_AraC,null,GH31,GH66,null,8.A.46.1.3,1.B.14.6.1
|
PUL0205 | Bacteroides congonensis |
| capsule polysaccharide degradation | MGYG000000764 | MGYG000000764_1|CGC1 |
8.A.46.1.1,1.B.14.6.1,GH97
|
PUL0204 | Porphyromonas |
| capsule polysaccharide degradation | MGYG000000825 | MGYG000000825_6|CGC3 |
1.B.14.6.1,8.A.46.1.1,null,GH31
|
PUL0205 | Duncaniella sp900544535 |
| capsule polysaccharide degradation | MGYG000000906 | MGYG000000906_2|CGC8 |
GH13,GH97,1.B.14.6.1,8.A.46.1.1,null,GH13_10|GH13|CBM48
|
PUL0204 | Phocaeicola sp900552075 |
| capsule polysaccharide degradation | MGYG000000964 | MGYG000000964_19|CGC1 |
8.A.46.1.1,1.B.14.6.1,GH97,GH13
|
PUL0204 | Phocaeicola salanitronis |
| capsule polysaccharide degradation | MGYG000001095 | MGYG000001095_465|CGC1 |
1.B.14.6.1,8.A.46.1.1,null,GH97
|
PUL0204 | Chryseobacterium gambrini |
| capsule polysaccharide degradation | MGYG000001139 | MGYG000001139_21|CGC1 |
PL0|PL12,null,9.B.18.1.3
|
PUL0248 | Collinsella sp900757595 |
| capsule polysaccharide degradation | MGYG000001240 | MGYG000001240_16|CGC1 |
GH13_6|GH13,GH13,GH13_14|CBM48|CBM25|CBM20|CBM41|GH13,GH97,CBM20|GH77,2.A.2.6.2,LacI,1.B.14.6.1,8.A.46.1.1
|
PUL0204 | Prevotella sp900557405 |
| capsule polysaccharide degradation | MGYG000001337 | MGYG000001337_2|CGC17 |
GT51,null,null,GH36,GH31,8.A.46.1.5,1.B.14.6.1
|
PUL0205 | Bacteroides fragilis |
| capsule polysaccharide degradation | MGYG000001345 | MGYG000001345_36|CGC23 |
1.B.14.6.1,8.A.46.1.5,null,GH66,GH31,GH2,HTH_AraC+HTH_AraC,2.A.21.3.19,GH130,1.B.14.6.1
|
PUL0205 | Bacteroides xylanisolvens |
| capsule polysaccharide degradation | MGYG000001364 | MGYG000001364_17|CGC3 |
3.A.1.27.4,3.A.1.27.2,1.B.42.1.2,null,8.A.46.1.1,1.B.14.6.1,GH97,GH13
|
PUL0204 | Phocaeicola plebeius |
| capsule polysaccharide degradation | MGYG000001370 | MGYG000001370_43|CGC3 |
GH109,GH31|CBM32,null,8.A.46.1.5,1.B.14.6.1
|
PUL0205 | Bacteroides fluxus |
| capsule polysaccharide degradation | MGYG000001376 | MGYG000001376_5|CGC1 |
1.B.17.3.5,2.A.6.2.22,2.A.6.2.47,1.B.14.6.1,8.A.46.1.1,null,GH97,null,null,1.A.30.1.3,null,1.B.14.6.14,3.A.1.120.5,4.C.1.1.4
|
PUL0204 | Dysgonomonas gadei |
| capsule polysaccharide degradation | MGYG000001377 | MGYG000001377_2|CGC14 |
2.A.6.2.18,2.A.6.2.22,2.A.6.2.42,null,1.B.14.6.1,null,null,GH97,null,null,1.B.14.6.14,3.A.1.120.5,null,4.C.1.1.4
|
PUL0204 | Dysgonomonas mossii |
| capsule polysaccharide degradation | MGYG000001378 | MGYG000001378_1|CGC13 |
1.B.14.6.1,GH130,2.A.21.3.19,HTH_AraC+HTH_AraC,GH2,GH31,GH66,null,8.A.46.1.5,1.B.14.6.1
|
PUL0205 | Bacteroides ovatus |
| capsule polysaccharide degradation | MGYG000001413 | MGYG000001413_1|CGC7 |
PL0|PL12,null,9.B.18.1.3,null,null,8.A.3.2.3,8.A.3.2.1
|
PUL0248 | Enorma massiliensis |
| capsule polysaccharide degradation | MGYG000001689 | MGYG000001689_26|CGC1 |
8.A.59.2.1,HTH_AraC,SBP_bac_1,3.A.1.1.19,3.A.1.1.6,GH31,GH31,9.B.28.1.8,GH31,null,null,3.A.1.132.6
|
PUL0205 | Blautia coccoides |
| capsule polysaccharide degradation | MGYG000001720 | MGYG000001720_4|CGC1 |
1.B.14.6.1,null,null,GH32,GH32,null,1.A.14.2.2,MerR,GH92,null,GH92,null,1.B.14.6.1,GH28,null,null,GT2
|
PUL0203 | Prevotella sp002350355 |
| capsule polysaccharide degradation | MGYG000001774 | MGYG000001774_15|CGC1 |
GH13,GH97,null,GH13_36|GH13|CBM58,null,8.A.46.1.1,1.B.14.6.1,2.A.2.6.2
|
PUL0204 | CAG-831 sp000432775 |
| capsule polysaccharide degradation | MGYG000001783 | MGYG000001783_7|CGC1 |
3.A.1.27.4,3.A.1.27.2,1.B.42.1.2,null,8.A.46.1.1,1.B.14.6.1,GH97,GH13
|
PUL0204 | Phocaeicola sp900551065 |
| capsule polysaccharide degradation | MGYG000001789 | MGYG000001789_5|CGC2 |
GH13,GH97,1.B.14.6.1,8.A.46.1.1
|
PUL0204 | Phocaeicola sp002161565 |
| capsule polysaccharide degradation | MGYG000001925 | MGYG000001925_13|CGC1 |
GH13,GH97,1.B.14.6.1,8.A.46.1.1
|
PUL0204 | Phocaeicola sp900544675 |
| capsule polysaccharide degradation | MGYG000001963 | MGYG000001963_44|CGC1 |
2.A.66.1.25,null,8.A.46.1.1,1.B.14.6.1,GH97
|
PUL0204 | Phocaeicola sp000434735 |
| capsule polysaccharide degradation | MGYG000001977 | MGYG000001977_10|CGC3 |
GH13_20|GH13,GH97,1.B.14.6.1,8.A.46.1.1
|
PUL0204 | |
| capsule polysaccharide degradation | MGYG000002080 | MGYG000002080_10|CGC1 |
1.B.14.6.1,null,null,GH97,GH13|GH13_44|GH13_36,null,null,3.A.3.5.18
|
PUL0204 | Prevotella sp900544825 |
| capsule polysaccharide degradation | MGYG000002212 | MGYG000002212_90|CGC1 |
GH31,9.B.28.1.8,GH31,GH31,3.A.1.1.18,3.A.1.1.20
|
PUL0205 | |
| capsule polysaccharide degradation | MGYG000002281 | MGYG000002281_3|CGC2 |
GH13,GH97,1.B.14.6.1,8.A.46.1.1,null,null,GH13|GH13_36|CBM58
|
PUL0204 | Bacteroides faecis |
| capsule polysaccharide degradation | MGYG000002281 | MGYG000002281_4|CGC2 |
GH163,GH20,null,2.A.1.2.14,null,null,1.B.14.6.1,8.A.46.1.5,null,GH66,GH31,GH31,null,CBM38|CBM66|GH32
|
PUL0205 | Bacteroides faecis |
| capsule polysaccharide degradation | MGYG000002282 | MGYG000002282_1|CGC14 |
1.B.18.1.2,GT0,GT4,PL12_3|PL0
|
PUL0248 | Parabacteroides gordonii |
| capsule polysaccharide degradation | MGYG000002286 | MGYG000002286_3|CGC7 |
GH31,9.B.28.1.2,GH31,GH31,3.A.1.1.33,3.A.1.1.44,SBP_bac_1,HTH_AraC+HTH_AraC,8.A.59.2.1
|
PUL0205 | Blautia stercoris |
| capsule polysaccharide degradation | MGYG000002413 | MGYG000002413_1|CGC7 |
PL12_3|PL0,null,9.B.18.1.2
|
PUL0248 | Arabia massiliensis |
| capsule polysaccharide degradation | MGYG000002418 | MGYG000002418_2|CGC6 |
8.A.46.1.1,1.B.14.6.1,GH97,GH13
|
PUL0204 | Parabacteroides chinchillae |
| capsule polysaccharide degradation | MGYG000002437 | MGYG000002437_1|CGC17 |
GT2,null,GntR,3.A.1.132.6,null,GH31,9.B.28.1.8,GH31,GH31,3.A.1.1.6,3.A.1.1.41,SBP_bac_1,HTH_AraC+HTH_AraC,8.A.59.2.1
|
PUL0205 | Blautia hominis |
| capsule polysaccharide degradation | MGYG000002440 | MGYG000002440_11|CGC1 |
PL12|PL0,GT0,null,null,9.B.18.1.2,null,null,8.A.3.1.2
|
PUL0248 | Enteroscipio rubneri |
| capsule polysaccharide degradation | MGYG000002487 | MGYG000002487_9|CGC1 |
PL12_3|PL12,null,GT4,null,null,PL12_3|PL0,GT0,null,null,9.B.18.1.2,9.B.18.1.3
|
PUL0248 | Gordonibacter pamelaeae |
| capsule polysaccharide degradation | MGYG000002663 | MGYG000002663_7|CGC1 |
8.A.46.1.1,1.B.14.6.1,LacI,2.A.2.6.2,GH77|CBM20,GH97,GH13_14|CBM25|CBM20|GH13|CBM41|CBM48,GH13,GH13|GH13_6,3.A.1.121.4,3.A.8.1.1
|
PUL0204 | Prevotella sp900772835 |
| capsule polysaccharide degradation | MGYG000002695 | MGYG000002695_9|CGC2 |
PL12|PL0,GT4,9.B.18.1.3,null,8.A.3.2.3
|
PUL0248 | |
| capsule polysaccharide degradation | MGYG000002738 | MGYG000002738_19|CGC3 |
GH31,9.B.28.1.2,GH31,GH31,3.A.1.1.6,3.A.1.1.17
|
PUL0205 | |
| capsule polysaccharide degradation | MGYG000002756 | MGYG000002756_72|CGC1 |
8.A.59.2.1,HTH_AraC+HTH_AraC,SBP_bac_1,3.A.1.1.44,3.A.1.1.18,GH31,GH31,9.B.28.1.8,GH31
|
PUL0205 | Blautia sp900765525 |
| capsule polysaccharide degradation | MGYG000002922 | MGYG000002922_21|CGC1 |
CBM20|GH77,GH97,GH13,GH13_36|CBM58|GH13,null,8.A.46.1.1,1.B.14.6.1,2.A.2.6.2,8.A.59.2.1
|
PUL0204 | RC9 sp900541925 |
| capsule polysaccharide degradation | MGYG000002933 | MGYG000002933_9|CGC1 |
GH13,GH97,1.B.14.6.1,8.A.46.1.1
|
PUL0204 | Phocaeicola sp900540105 |
| capsule polysaccharide degradation | MGYG000002935 | MGYG000002935_30|CGC1 |
GH13,GH97,1.B.14.6.1,8.A.46.1.1,null,null,CBM50|GH73,null,2.A.35.1.1
|
PUL0204 | Phocaeicola sp002161765 |
| capsule polysaccharide degradation | MGYG000002992 | MGYG000002992_10|CGC1 |
PL12_3|PL12,GT0,null,null,GT26,9.B.18.1.2,null,null,8.A.3.2.3,8.A.3.2.3
|
PUL0248 | Dorea |
| capsule polysaccharide degradation | MGYG000003132 | MGYG000003132_16|CGC1 |
1.B.17.3.5,2.A.6.2.22,2.A.6.2.44,1.B.14.6.1,8.A.46.1.1,null,GH97
|
PUL0204 | Dysgonomonas sp900556485 |
| capsule polysaccharide degradation | MGYG000003252 | MGYG000003252_52|CGC7 |
1.B.14.6.1,8.A.46.1.3,null,GH66,GH31
|
PUL0205 | Bacteroides sp900761785 |
| capsule polysaccharide degradation | MGYG000003312 | MGYG000003312_100|CGC4 |
1.B.14.6.1,FecR,Sigma70_r2+Sigma70_r4_2,GH65,GH66,null,8.A.46.1.5,1.B.14.6.1
|
PUL0205 | Bacteroides sp900547205 |
| capsule polysaccharide degradation | MGYG000003351 | MGYG000003351_509|CGC1 |
8.A.46.1.1,1.B.14.6.1,GH97,GH13
|
PUL0204 | Bacteroides sp900765785 |
| capsule polysaccharide degradation | MGYG000003419 | MGYG000003419_199|CGC1 |
2.A.7.18.4,GH31,null,null,8.A.46.1.5,1.B.14.6.1,GH36
|
PUL0205 | RF16 sp900766775 |
| capsule polysaccharide degradation | MGYG000003423 | MGYG000003423_43|CGC1 |
1.B.14.6.1,LacI,none,2.A.2.6.2,GH13,GH97
|
PUL0204 | W3P20-009 sp900766825 |
| capsule polysaccharide degradation | MGYG000003462 | MGYG000003462_26|CGC1 |
9.B.18.1.3,null,PL12|PL0
|
PUL0248 | Collinsella sp900767675 |
| capsule polysaccharide degradation | MGYG000003573 | MGYG000003573_214|CGC1 |
8.A.59.2.1,2.A.2.6.3,1.B.14.6.1,8.A.46.1.1,null,CBM58|GH13|GH13_36,null,null,GH13|GH13_36,GH97
|
PUL0204 | RC9 sp900769905 |
| capsule polysaccharide degradation | MGYG000003662 | MGYG000003662_56|CGC3 |
1.B.14.6.1,null,null,GH32,GH2
|
PUL0203 | Prevotella sp900771975 |
| capsule polysaccharide degradation | MGYG000003693 | MGYG000003693_7|CGC1 |
GH13,GH97,1.B.14.6.1,8.A.46.1.1,null,1.B.42.1.2,3.A.1.27.2,3.A.1.27.4
|
PUL0204 | Phocaeicola plebeius |
| capsule polysaccharide degradation | MGYG000003771 | MGYG000003771_13|CGC1 |
8.A.59.2.1,HTH_AraC+HTH_AraC,SBP_bac_1,3.A.1.1.44,3.A.1.1.18,GH31,GH31,9.B.28.1.8,GH31,null,3.A.1.132.6
|
PUL0205 | Blautia sp002161285 |
| capsule polysaccharide degradation | MGYG000003880 | MGYG000003880_3|CGC2 |
8.A.59.2.1,2.A.2.6.2,1.B.14.6.1,null,null,GH13|GH13_36|CBM58,GH13,GH97,GH77|CBM20,null,null,2.A.6.4.3
|
PUL0204 | RC9 sp900543205 |
| capsule polysaccharide degradation | MGYG000003952 | MGYG000003952_9|CGC1 |
8.A.59.2.1,2.A.2.6.3,1.B.14.6.1,8.A.46.1.1,null,GH13|CBM58|GH13_36,GH13,GH97
|
PUL0204 | Alistipes sp900021155 |
| capsule polysaccharide degradation | MGYG000004009 | MGYG000004009_2|CGC1 |
2.A.2.6.2,LacI,1.B.14.6.1,8.A.46.1.1,null,null,9.B.196.1.2,CBM20|GH77,GH97,GH13|GH13_14|CBM48,GH13
|
PUL0204 | |
| capsule polysaccharide degradation | MGYG000004182 | MGYG000004182_16|CGC1 |
GH13,GH97,1.B.14.6.1,8.A.46.1.1,null,1.B.42.1.2,3.A.1.27.2,3.A.1.27.4
|
PUL0204 | Phocaeicola sp900551445 |
| capsule polysaccharide degradation | MGYG000004247 | MGYG000004247_50|CGC1 |
9.B.18.1.3,9.B.18.1.2,null,null,GT0,PL0|PL12_3
|
PUL0248 | |
| capsule polysaccharide degradation | MGYG000004291 | MGYG000004291_3|CGC1 |
9.B.146.1.4,null,null,GH97,1.B.14.6.1,8.A.46.1.1,null,null,GH13|GH13_6
|
PUL0204 | Alloprevotella tannerae |
| capsule polysaccharide degradation | MGYG000004456 | MGYG000004456_11|CGC1 |
1.B.14.6.1,8.A.46.1.5,GH31|CBM32
|
PUL0205 | Prevotella sp900556795 |
| capsule polysaccharide degradation | MGYG000004465 | MGYG000004465_32|CGC1 |
2.A.2.6.3,1.B.14.6.1,8.A.46.1.1,null,null,GH97,GH13,GH13
|
PUL0204 | |
| capsule polysaccharide degradation | MGYG000004479 | MGYG000004479_16|CGC1 |
3.A.1.27.4,3.A.1.27.2,1.B.42.1.2,null,8.A.46.1.1,1.B.14.6.1,GH97,GH13
|
PUL0204 | Phocaeicola mediterraneensis |
| capsule polysaccharide degradation | MGYG000004491 | MGYG000004491_10|CGC2 |
8.A.46.1.1,1.B.14.6.1,LacI,2.A.2.6.2,GH77|CBM20,GH97,GH13|CBM25|CBM20|CBM41|GH13_14|CBM48,GH13,GH13|GH13_6
|
PUL0204 | Prevotella sp900548745 |
| capsule polysaccharide degradation | MGYG000004569 | MGYG000004569_24|CGC1 |
2.A.7.18.4,GH31,null,null,8.A.46.1.5,1.B.14.6.1,GH36
|
PUL0205 | RF16 sp900556095 |
| capsule polysaccharide degradation | MGYG000004632 | MGYG000004632_35|CGC1 |
8.A.46.1.1,1.B.14.6.1,null,LacI,2.A.2.6.2,CBM20|GH77,GH97,CBM48|GH13|GH13_14|CBM41,null,GH13,GH13_6|GH13
|
PUL0204 | Prevotella sp002300055 |
| capsule polysaccharide degradation | MGYG000004747 | MGYG000004747_16|CGC1 |
8.A.59.2.1,HTH_AraC+HTH_AraC,SBP_bac_1,3.A.1.1.17,3.A.1.1.6,GH31,GH31,9.B.28.1.2,GH31,null,null,3.A.1.132.6
|
PUL0205 | Blautia sp900753905 |
| capsule polysaccharide degradation | MGYG000004790 | MGYG000004790_25|CGC1 |
GH77|CBM20,GH97,GH13,GH13_36|CBM58|GH13,null,null,1.B.14.6.1,2.A.2.6.3,9.B.33.1.1
|
PUL0204 |